If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ), 'gf_id' => 'HOM05D000525', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000525' ), 'data_identifier' => 'HOM05D000525', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000525', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1037', 'num_species' => '94' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p35180' => 'bna', 'A02p19710' => 'bna', 'A02p44410' => 'bna', 'A03p02780' => 'bna', 'A04p04280' => 'bna', 'A05p30100' => 'bna', 'A07p17210' => 'bna', 'A07p22660' => 'bna', 'A07p29030' => 'bna', 'A07p44490' => 'bna', 'A08p03540' => 'bna', 'A08p26120' => 'bna', 'A09p48710' => 'bna', 'A10p30530' => 'bna', 'Aa31LG10G10710' => 'aar', 'Aa31LG10G4240' => 'aar', 'Aa31LG11G6850' => 'aar', 'Aa31LG1G15280' => 'aar', 'Aa31LG4G1600' => 'aar', 'Aa31LG4G5350' => 'aar', 'Aa31LG8G6280' => 'aar', 'Aa31sc291G20' => 'aar', 'Aa31sc49G70' => 'aar', 'Actinidia00398' => 'ach', 'Actinidia04376' => 'ach', 'Actinidia10178' => 'ach', 'Actinidia12751' => 'ach', 'Actinidia15317' => 'ach', 'Actinidia17291' => 'ach', 'Actinidia22555' => 'ach', 'Actinidia22674' => 'ach', 'Actinidia25335' => 'ach', 'Actinidia26207' => 'ach', 'Actinidia27701' => 'ach', 'Actinidia27980' => 'ach', 'Actinidia29662' => 'ach', 'Actinidia34384' => 'ach', 'Actinidia38602' => 'ach', 'Ah.03g139370' => 'amhyb', 'Ah.05g167220' => 'amhyb', 'Ah.06g185620' => 'amhyb', 'Ah.10g036760' => 'amhyb', 'Ah.11g042910' => 'amhyb', 'Ah.16g102850' => 'amhyb', 'AL1G41210' => 'aly', 'AL1G57380' => 'aly', 'AL2G35060' => 'aly', 'AL2G40030' => 'aly', 'AL3G32950' => 'aly', 'AL5G36980' => 'aly', 'AL6G15750' => 'aly', 'AL6G16700' => 'aly', 'AL8G44730' => 'aly', 'Aqoxy1G00777' => 'aox', 'Aqoxy2G00462' => 'aox', 'Aqoxy5G01671' => 'aox', 'Aqoxy6G01064' => 'aox', 'Aqoxy6G02798' => 'aox', 'arahy.Tifrunner.gnm1.ann1.05MAMP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.06Z89H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0Y53Q4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1CQ2W9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2SS4VP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3E7GE6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3S4IY9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5F574X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5ZL4FA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.61109J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.7H5FB5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9TIX72' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AB2F1A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C8LMSE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHA1GR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHP91T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EPZ5Z8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FXW1EB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G7ZPIG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H4NR85' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I63VJS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2M2ZA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P60IZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P9URPG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PX4F8W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9W41L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RRDD93' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S73YF0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U7DTPD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X8IX23' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGC0YR' => 'arhy', 'AT1G27690' => 'ath', 'AT1G49840' => 'ath', 'AT1G75160' => 'ath', 'AT1G79420' => 'ath', 'AT3G19540' => 'ath', 'AT3G55720' => 'ath', 'AT5G05840' => 'ath', 'AT5G06610' => 'ath', 'AT5G66740' => 'ath', 'ATR0001G045' => 'atr', 'ATR0210G039' => 'atr', 'ATR0269G001' => 'atr', 'ATR0618G338' => 'atr', 'ATR0661G347' => 'atr', 'ATR0763G241' => 'atr', 'ATR1132G082' => 'atr', 'Atru.chr1.53' => 'acertr', 'Atru.chr12.280' => 'acertr', 'Atru.chr13.500' => 'acertr', 'Atru.chr13.798' => 'acertr', 'Atru.chr3.551' => 'acertr', 'Atru.chr5.2427' => 'acertr', 'Atru.chr8.1209' => 'acertr', 'AUR62003172' => 'cqu', 'AUR62007989' => 'cqu', 'AUR62012176' => 'cqu', 'AUR62019604' => 'cqu', 'AUR62022812' => 'cqu', 'AUR62037449' => 'cqu', 'AUR62037576' => 'cqu', 'AUR62038781' => 'cqu', 'BcaB01g00067' => 'bca', 'BcaB02g06996' => 'bca', 'BcaB02g07000' => 'bca', 'BcaB02g07003' => 'bca', 'BcaB02g07010' => 'bca', 'BcaB02g08402' => 'bca', 'BcaB02g09996' => 'bca', 'BcaB04g17292' => 'bca', 'BcaB04g20698' => 'bca', 'BcaB05g24886' => 'bca', 'BcaB06g26013' => 'bca', 'BcaC01g01582' => 'bca', 'BcaC01g06934' => 'bca', 'BcaC01g06935' => 'bca', 'BcaC02g09787' => 'bca', 'BcaC02g09788' => 'bca', 'BcaC03g15542' => 'bca', 'BcaC03g18402' => 'bca', 'BcaC05g28405' => 'bca', 'BcaC05g28466' => 'bca', 'BcaC06g32292' => 'bca', 'BcaC06g34737' => 'bca', 'BcaC06g35310' => 'bca', 'BcaC06g36486' => 'bca', 'BcaC07g39899' => 'bca', 'BcaC07g42012' => 'bca', 'BcaC08g45357' => 'bca', 'BcaC08g45358' => 'bca', 'BcaC08g47503' => 'bca', 'BcaC09g48915' => 'bca', 'BcaC09g48916' => 'bca', 'BcaC09g48917' => 'bca', 'BcaNung06577' => 'bca', 'BcaNung06795' => 'bca', 'BcaNung07087' => 'bca', 'BolC1t04426H' => 'bol', 'BolC2t09262H' => 'bol', 'BolC2t12542H' => 'bol', 'BolC3t12865H' => 'bol', 'BolC3t19697H' => 'bol', 'BolC4t25112H' => 'bol', 'BolC5t33275H' => 'bol', 'BolC6t37486H' => 'bol', 'BolC6t38151H' => 'bol', 'BolC6t38402H' => 'bol', 'BolC6t40349H' => 'bol', 'BolC7t42265H' => 'bol', 'BolC7t43038H' => 'bol', 'BolC8t47173H' => 'bol', 'BolC8t50726H' => 'bol', 'BolC9t54415H' => 'bol', 'BolC9t59863H' => 'bol', 'BraA01t03599Z' => 'bra', 'BraA02t07007Z' => 'bra', 'BraA02t09358Z' => 'bra', 'BraA03t09641Z' => 'bra', 'BraA04t16140Z' => 'bra', 'BraA05t21850Z' => 'bra', 'BraA06t24704Z' => 'bra', 'BraA07t29448Z' => 'bra', 'BraA07t30543Z' => 'bra', 'BraA07t31959Z' => 'bra', 'BraA08t32387Z' => 'bra', 'BraA08t34562Z' => 'bra', 'BraA09t40323Z' => 'bra', 'BraA09t41990Z' => 'bra', 'BraA10t45094Z' => 'bra', 'C01p44600' => 'bna', 'C02p32330' => 'bna', 'C02p64810' => 'bna', 'C03p03200' => 'bna', 'C03p74490' => 'bna', 'C04p36600' => 'bna', 'C05p45520' => 'bna', 'C06p29900' => 'bna', 'C06p32800' => 'bna', 'C06p53320' => 'bna', 'C07p03710' => 'bna', 'C07p17580' => 'bna', 'C07p25070' => 'bna', 'C08p03740' => 'bna', 'C08p31030' => 'bna', 'C09p15090' => 'bna', 'C09p70990' => 'bna', 'CAN.G1054.15' => 'can', 'CAN.G1126.45' => 'can', 'CAN.G358.112' => 'can', 'CAN.G598.4' => 'can', 'CAN.G606.26' => 'can', 'CANSAT01G1000' => 'cansat', 'CANSAT25G1609' => 'cansat', 'CANSAT25G2250' => 'cansat', 'CANSAT25G2531' => 'cansat', 'CANSAT25G3166' => 'cansat', 'CANSAT41G0004' => 'cansat', 'CANSAT56G3831' => 'cansat', 'CANSAT64G2861' => 'cansat', 'CARHR027180' => 'chi', 'CARHR039890' => 'chi', 'CARHR068490' => 'chi', 'CARHR073080' => 'chi', 'CARHR094960' => 'chi', 'CARHR165820' => 'chi', 'CARHR206590' => 'chi', 'CARHR207410' => 'chi', 'CARHR280980' => 'chi', 'Carub.0001s2619' => 'cru', 'Carub.0001s3905' => 'cru', 'Carub.0002s2197' => 'cru', 'Carub.0002s2628' => 'cru', 'Carub.0003s1937' => 'cru', 'Carub.0005s2251' => 'cru', 'Carub.0006s0474' => 'cru', 'Carub.0006s0550' => 'cru', 'Carub.0008s2776' => 'cru', 'Ca_03184_v3' => 'car', 'Ca_05918_v3' => 'car', 'Ca_11051_v3' => 'car', 'Ca_13348_v3' => 'car', 'Ca_15519_v3' => 'car', 'Ca_15919_v3' => 'car', 'Ca_17134_v3' => 'car', 'Ca_25940_v3' => 'car', 'Ca_30141_v3' => 'car', 'Cc02_g07110' => 'ccan', 'Cc02_g19530' => 'ccan', 'Cc05_g16580' => 'ccan', 'Cc06_g23290' => 'ccan', 'Cc06_g23300' => 'ccan', 'Cc07_g09310' => 'ccan', 'Cc10_g03030' => 'ccan', 'Cc10_g05470' => 'ccan', 'CDE01G0322' => 'cde', 'CDE01G0395' => 'cde', 'CDE01G0525' => 'cde', 'CDE01G0706' => 'cde', 'CDE02G0466' => 'cde', 'CDE02G1518' => 'cde', 'CDE02G3259' => 'cde', 'CDE04G1746' => 'cde', 'CDE05G1344' => 'cde', 'CDE06G2111' => 'cde', 'CDE07G1173' => 'cde', 'Cfa001385' => 'cfa', 'Cfa004288' => 'cfa', 'Cfa004617' => 'cfa', 'Cfa010346' => 'cfa', 'Cfa010677' => 'cfa', 'Cfa017881' => 'cfa', 'Cfa019369' => 'cfa', 'Cfa020120' => 'cfa', 'Ciclev10001042m.g' => 'ccl', 'Ciclev10003238m.g' => 'ccl', 'Ciclev10005147m.g' => 'ccl', 'Ciclev10013489m.g' => 'ccl', 'Ciclev10027476m.g' => 'ccl', 'Ciclev10028343m.g' => 'ccl', 'Ciclev10031543m.g' => 'ccl', 'CiPaw.01G035900' => 'cil', 'CiPaw.02G188700' => 'cil', 'CiPaw.05G014200' => 'cil', 'CiPaw.06G167800' => 'cil', 'CiPaw.09G026300' => 'cil', 'CiPaw.10G024000' => 'cil', 'CiPaw.11G056700' => 'cil', 'CiPaw.15G046700' => 'cil', 'CiPaw.15G076200' => 'cil', 'CiPaw.16G033500' => 'cil', 'ClCG01G019430' => 'cla', 'ClCG05G019110' => 'cla', 'ClCG05G020400' => 'cla', 'ClCG08G016320' => 'cla', 'ClCG09G022870' => 'cla', 'ClCG10G010590' => 'cla', 'ClCG10G017760' => 'cla', 'ClCG11G006450' => 'cla', 'COL.COLO4_05468' => 'col', 'COL.COLO4_05741' => 'col', 'COL.COLO4_24978' => 'col', 'COL.COLO4_25597' => 'col', 'COL.COLO4_26335' => 'col', 'COL.COLO4_26336' => 'col', 'COL.COLO4_28549' => 'col', 'COL.COLO4_29431' => 'col', 'COL.COLO4_32558' => 'col', 'Cpa.g.c46749' => 'cpa', 'Cpa.g.sc116.61' => 'cpa', 'Cpa.g.sc1633.1' => 'cpa', 'Cpa.g.sc1633.2' => 'cpa', 'Cpa.g.sc19.240' => 'cpa', 'Cpa.g.sc200.1' => 'cpa', 'Cpa.g.sc32.95' => 'cpa', 'Cpa.g.sc64.79' => 'cpa', 'Cpa.g.sc85.27' => 'cpa', 'CsaV3_2G026290' => 'csa', 'CsaV3_3G038530' => 'csa', 'CsaV3_3G038540' => 'csa', 'CsaV3_3G045030' => 'csa', 'CsaV3_4G000510' => 'csa', 'CsaV3_4G023350' => 'csa', 'CsaV3_4G034880' => 'csa', 'CsaV3_6G001550' => 'csa', 'CsaV3_6G046140' => 'csa', 'CsaV3_7G005570' => 'csa', 'CSS0004747' => 'camsi', 'CSS0012582' => 'camsi', 'CSS0013174' => 'camsi', 'CSS0014903' => 'camsi', 'CSS0021303' => 'camsi', 'CSS0023654' => 'camsi', 'CSS0028827' => 'camsi', 'CSS0028866' => 'camsi', 'CSS0029362' => 'camsi', 'CSS0044767' => 'camsi', 'CSS0045425' => 'camsi', 'CSS0045807' => 'camsi', 'DCAR_001665' => 'dca', 'DCAR_008846' => 'dca', 'DCAR_009661' => 'dca', 'DCAR_011769' => 'dca', 'DCAR_012807' => 'dca', 'DCAR_019526' => 'dca', 'DCAR_019868' => 'dca', 'DCAR_020081' => 'dca', 'DCAR_021974' => 'dca', 'DCAR_024845' => 'dca', 'DCAR_025924' => 'dca', 'DCAR_029103' => 'dca', 'Dinv15780' => 'din', 'Dinv20925' => 'din', 'Dinv21019' => 'din', 'Dinv24033' => 'din', 'Dinv25003' => 'din', 'Dinv25007' => 'din', 'Dinv25010' => 'din', 'Dinv25012' => 'din', 'Dinv26819' => 'din', 'Dinv34440' => 'din', 'Dinv36069' => 'din', 'Dinv39236' => 'din', 'Dinv39408' => 'din', 'Dinv42211' => 'din', 'Dinv42459' => 'din', 'Dinv44988' => 'din', 'Duzib041G0252' => 'dzi', 'Duzib052G0513' => 'dzi', 'Duzib093G0510' => 'dzi', 'Duzib093G1366' => 'dzi', 'Duzib093G2064' => 'dzi', 'Duzib114G0208' => 'dzi', 'Duzib128G0050' => 'dzi', 'Duzib128G0457' => 'dzi', 'Duzib132G1174' => 'dzi', 'Duzib147G0497' => 'dzi', 'Duzib213G0927' => 'dzi', 'Duzib248G1521' => 'dzi', 'Duzib268G0105' => 'dzi', 'ECA232G2277' => 'eca', 'ECA234G2092' => 'eca', 'ECA236G4977' => 'eca', 'ECA238G2057' => 'eca', 'ECA238G3896' => 'eca', 'ECA246G4922' => 'eca', 'ECA247G1182' => 'eca', 'EL10Ac2g04758' => 'bvu', 'EL10Ac4g08381' => 'bvu', 'EL10Ac6g14929' => 'bvu', 'EL10As7g23818' => 'bvu', 'Eucgr.A02505' => 'egr', 'Eucgr.F00130' => 'egr', 'Eucgr.F02268' => 'egr', 'Eucgr.F04476' => 'egr', 'Eucgr.G01292' => 'egr', 'Eucgr.H00954' => 'egr', 'Eucgr.I01085' => 'egr', 'Eucgr.I02458' => 'egr', 'Eucgr.J00255' => 'egr', 'FAN01G0711' => 'fan', 'FAN02G3450' => 'fan', 'FAN03G0873' => 'fan', 'FAN05G0971' => 'fan', 'FAN06G0323' => 'fan', 'FAN06G1010' => 'fan', 'FAN06G3674' => 'fan', 'FAN08G1490' => 'fan', 'FAN09G4207' => 'fan', 'FAN10G2104' => 'fan', 'FAN10G3137' => 'fan', 'FAN10G4246' => 'fan', 'FAN11G3427' => 'fan', 'FAN12G2336' => 'fan', 'FAN13G2038' => 'fan', 'FAN14G1547' => 'fan', 'FAN14G4518' => 'fan', 'FAN15G0621' => 'fan', 'FAN15G0767' => 'fan', 'FAN15G1431' => 'fan', 'FAN16G3149' => 'fan', 'FAN18G2400' => 'fan', 'FAN18G3257' => 'fan', 'FAN19G2376' => 'fan', 'FAN20G1123' => 'fan', 'FAN20G1612' => 'fan', 'FAN20G1977' => 'fan', 'FAN21G3320' => 'fan', 'FAN23G0397' => 'fan', 'FAN24G0127' => 'fan', 'FAN24G1525' => 'fan', 'FAN25G3606' => 'fan', 'FAN26G2133' => 'fan', 'FAN27G0333' => 'fan', 'FAN27G1245' => 'fan', 'FAN27G2055' => 'fan', 'FAN28G1222' => 'fan', 'FvH4_1g13560' => 'fve', 'FvH4_2g04650' => 'fve', 'FvH4_2g33400' => 'fve', 'FvH4_2g39940' => 'fve', 'FvH4_3g14040' => 'fve', 'FvH4_5g14750' => 'fve', 'FvH4_6g21510' => 'fve', 'FvH4_7g23730' => 'fve', 'Glyma.01G174600' => 'gma', 'Glyma.02G169000' => 'gma', 'Glyma.02G252900' => 'gma', 'Glyma.03G207100' => 'gma', 'Glyma.04G032951' => 'gma', 'Glyma.06G032900' => 'gma', 'Glyma.07G217300' => 'gma', 'Glyma.08G163400' => 'gma', 'Glyma.09G104500' => 'gma', 'Glyma.10G259500' => 'gma', 'Glyma.11G066700' => 'gma', 'Glyma.11G225700' => 'gma', 'Glyma.14G063600' => 'gma', 'Glyma.14G087300' => 'gma', 'Glyma.15G263800' => 'gma', 'Glyma.17G237000' => 'gma', 'Glyma.17G249700' => 'gma', 'Glyma.18G031600' => 'gma', 'Glyma.19G204600' => 'gma', 'Glyma.20G131300' => 'gma', 'Gohir.A01G116300' => 'ghi', 'Gohir.A01G121100' => 'ghi', 'Gohir.A03G184700' => 'ghi', 'Gohir.A04G050000' => 'ghi', 'Gohir.A04G119000' => 'ghi', 'Gohir.A05G195000' => 'ghi', 'Gohir.A06G022600' => 'ghi', 'Gohir.A09G129900' => 'ghi', 'Gohir.A10G227900' => 'ghi', 'Gohir.A12G020700' => 'ghi', 'Gohir.A12G065200' => 'ghi', 'Gohir.A13G044800' => 'ghi', 'Gohir.D01G104700' => 'ghi', 'Gohir.D01G108600' => 'ghi', 'Gohir.D02G206200' => 'ghi', 'Gohir.D04G160700' => 'ghi', 'Gohir.D05G198200' => 'ghi', 'Gohir.D05G330500' => 'ghi', 'Gohir.D06G019800' => 'ghi', 'Gohir.D09G126000' => 'ghi', 'Gohir.D10G242008' => 'ghi', 'Gohir.D12G021000' => 'ghi', 'Gohir.D12G065300' => 'ghi', 'Gohir.D13G044000' => 'ghi', 'Gorai.002G128700' => 'gra', 'Gorai.002G132800' => 'gra', 'Gorai.005G233600' => 'gra', 'Gorai.006G144900' => 'gra', 'Gorai.008G021300' => 'gra', 'Gorai.008G068600' => 'gra', 'Gorai.009G203300' => 'gra', 'Gorai.009G354700' => 'gra', 'Gorai.010G024300' => 'gra', 'Gorai.011G278300' => 'gra', 'Gorai.012G148500' => 'gra', 'Gorai.013G048800' => 'gra', 'GSVIVG01009382001' => 'vvi', 'GSVIVG01009692001' => 'vvi', 'GSVIVG01016395001' => 'vvi', 'GSVIVG01018987001' => 'vvi', 'GSVIVG01033432001' => 'vvi', 'GSVIVG01036716001' => 'vvi', 'GSVIVG01037884001' => 'vvi', 'HanXRQChr01g0026601' => 'han', 'HanXRQChr02g0039581' => 'han', 'HanXRQChr03g0075411' => 'han', 'HanXRQChr03g0093661' => 'han', 'HanXRQChr05g0146681' => 'han', 'HanXRQChr07g0201891' => 'han', 'HanXRQChr10g0288741' => 'han', 'HanXRQChr11g0322551' => 'han', 'HanXRQChr13g0407791' => 'han', 'HanXRQChr14g0438291' => 'han', 'HanXRQChr14g0458911' => 'han', 'HanXRQChr15g0496191' => 'han', 'HanXRQChr16g0509131' => 'han', 'HanXRQChr16g0530151' => 'han', 'HanXRQChr17g0557131' => 'han', 'Haze_07761' => 'cav', 'Haze_10215' => 'cav', 'Haze_15111' => 'cav', 'Haze_17164' => 'cav', 'Haze_17201' => 'cav', 'Haze_17982' => 'cav', 'Haze_18285' => 'cav', 'Haze_20061' => 'cav', 'Haze_20064' => 'cav', 'Haze_20068' => 'cav', 'Hma1.2p1_0023F.1_g014860' => 'hma', 'Hma1.2p1_0023F.1_g014870' => 'hma', 'Hma1.2p1_0026F.1_g016790' => 'hma', 'Hma1.2p1_0124F.1_g058462' => 'hma', 'Hma1.2p1_0124F.1_g058467' => 'hma', 'Hma1.2p1_0124F.1_g058470' => 'hma', 'Hma1.2p1_0124F.1_g058480' => 'hma', 'Hma1.2p1_0151F.1_g067000' => 'hma', 'Hma1.2p1_0304F.1_g119301' => 'hma', 'Hma1.2p1_0469F.1_g159170' => 'hma', 'Hma1.2p1_0581F.1_g182970' => 'hma', 'Hma1.2p1_0923F.1_g237080' => 'hma', 'Hma1.2p1_1023F.1_g248960' => 'hma', 'Hma1.2p1_1518F.1_g288550' => 'hma', 'HPP92_000934' => 'vpl', 'HPP92_001480' => 'vpl', 'HPP92_007851' => 'vpl', 'HPP92_007942' => 'vpl', 'HPP92_010140' => 'vpl', 'HPP92_014235' => 'vpl', 'HPP92_017574' => 'vpl', 'HPP92_018491' => 'vpl', 'HPP92_026496' => 'vpl', 'HPP92_026562' => 'vpl', 'HPP92_026563' => 'vpl', 'HPP92_028315' => 'vpl', 'HPP92_028326' => 'vpl', 'Hund05319' => 'sun', 'Hund10540' => 'sun', 'Hund13820' => 'sun', 'Hund14144' => 'sun', 'Hund16014' => 'sun', 'Lalb_Chr02g0145161' => 'lal', 'Lalb_Chr04g0250891' => 'lal', 'Lalb_Chr05g0212901' => 'lal', 'Lalb_Chr06g0165311' => 'lal', 'Lalb_Chr09g0322541' => 'lal', 'Lalb_Chr11g0062801' => 'lal', 'Lalb_Chr14g0368351' => 'lal', 'Lalb_Chr18g0052861' => 'lal', 'Lalb_Chr20g0116741' => 'lal', 'Lalb_Chr21g0308201' => 'lal', 'Lalb_Chr22g0354771' => 'lal', 'Lalb_Chr23g0266631' => 'lal', 'Lalb_Chr24g0399011' => 'lal', 'Lalb_Chr25g0284321' => 'lal', 'Lalb_Chr25g0287621' => 'lal', 'Lj1A1134T64' => 'lonja', 'Lj1A948T47' => 'lonja', 'Lj1g0007188' => 'lja', 'Lj1g0014082' => 'lja', 'Lj2C449G4' => 'lonja', 'Lj2C8T5' => 'lonja', 'Lj2C8T6' => 'lonja', 'Lj2g0013126' => 'lja', 'Lj3g0026200' => 'lja', 'Lj4A199G78' => 'lonja', 'Lj4A42T74' => 'lonja', 'Lj4A67T60' => 'lonja', 'Lj4C761T11' => 'lonja', 'Lj5C216T7' => 'lonja', 'Lj5g0006046' => 'lja', 'Lj5g0008085' => 'lja', 'Lj5g0015898' => 'lja', 'Lj5g0017793' => 'lja', 'Lj6g0013908' => 'lja', 'Lj9A326T73' => 'lonja', 'Lj9C326T4' => 'lonja', 'LjContig00141g0018683' => 'lja', 'Lsat_1_v5_gn_1_23241' => 'lsa', 'Lsat_1_v5_gn_2_120101' => 'lsa', 'Lsat_1_v5_gn_2_58660' => 'lsa', 'Lsat_1_v5_gn_3_78560' => 'lsa', 'Lsat_1_v5_gn_5_113681' => 'lsa', 'Lsat_1_v5_gn_7_85980' => 'lsa', 'Lsat_1_v5_gn_9_63061' => 'lsa', 'Manes.01G133700' => 'mes', 'Manes.02G091900' => 'mes', 'Manes.03G077600' => 'mes', 'Manes.05G161200' => 'mes', 'Manes.05G180000' => 'mes', 'Manes.07G066800' => 'mes', 'Manes.07G123500' => 'mes', 'Manes.08G040200' => 'mes', 'Manes.10G019900' => 'mes', 'Manes.10G073200' => 'mes', 'Manes.16G046300' => 'mes', 'Manes.18G028000' => 'mes', 'Manes.18G043800' => 'mes', 'Mapoly0067s0087' => 'mpo', 'MBI01_g20509_MAGBIO' => 'mbi', 'MBI01_g47226_MAGBIO' => 'mbi', 'MBI14_g28030_MAGBIO' => 'mbi', 'MBI14_g45811_MAGBIO' => 'mbi', 'MBI16_g17465_MAGBIO' => 'mbi', 'MBI16_g24391_MAGBIO' => 'mbi', 'MD01G1144500' => 'mdo', 'MD02G1150900' => 'mdo', 'MD05G1094100' => 'mdo', 'MD05G1238500' => 'mdo', 'MD07G1210900' => 'mdo', 'MD07G1211100' => 'mdo', 'MD08G1034000' => 'mdo', 'MD08G1088800' => 'mdo', 'MD10G1100800' => 'mdo', 'MD10G1216800' => 'mdo', 'MD12G1052000' => 'mdo', 'MD14G1050800' => 'mdo', 'MD15G1030800' => 'mdo', 'MD15G1073800' => 'mdo', 'MD15G1265400' => 'mdo', 'Medtr1g018620' => 'mtr', 'Medtr1g022065' => 'mtr', 'Medtr1g022075' => 'mtr', 'Medtr1g054670' => 'mtr', 'Medtr1g106875' => 'mtr', 'Medtr3g069720' => 'mtr', 'Medtr3g102670' => 'mtr', 'Medtr3g111790' => 'mtr', 'Medtr5g019880' => 'mtr', 'Medtr5g081550' => 'mtr', 'Medtr6g445110' => 'mtr', 'MELO3C003856.2' => 'cme', 'MELO3C007817.2' => 'cme', 'MELO3C008264.2' => 'cme', 'MELO3C009597.2' => 'cme', 'MELO3C010821.2' => 'cme', 'MELO3C014680.2' => 'cme', 'MELO3C016802.2' => 'cme', 'MELO3C017985.2' => 'cme', 'Migut.B00412' => 'egut', 'Migut.C00505' => 'egut', 'Migut.C00712' => 'egut', 'Migut.F00725' => 'egut', 'Migut.F01364' => 'egut', 'Migut.F01571' => 'egut', 'Migut.H01005' => 'egut', 'Migut.J01875' => 'egut', 'Migut.M01501' => 'egut', 'Migut.N01154' => 'egut', 'Migut.N02763' => 'egut', 'MSTRG.1044' => 'ama', 'MSTRG.1286' => 'ama', 'MSTRG.16092' => 'ama', 'MSTRG.16698' => 'ama', 'MSTRG.20200' => 'ama', 'MSTRG.22231' => 'ama', 'MSTRG.238' => 'ama', 'MSTRG.24363' => 'ama', 'MSTRG.25048' => 'ama', 'MSTRG.27751' => 'ama', 'MSTRG.4867' => 'ama', 'MSTRG.6503' => 'ama', 'MSTRG.7094' => 'ama', 'MSTRG.8295' => 'ama', 'MSTRG.8981' => 'ama', 'Nitab4.5_0000110g0530' => 'nta', 'Nitab4.5_0000226g0030' => 'nta', 'Nitab4.5_0000278g0050' => 'nta', 'Nitab4.5_0000523g0040' => 'nta', 'Nitab4.5_0000523g0060' => 'nta', 'Nitab4.5_0000523g0070' => 'nta', 'Nitab4.5_0000934g0140' => 'nta', 'Nitab4.5_0001277g0060' => 'nta', 'Nitab4.5_0001279g0020' => 'nta', 'Nitab4.5_0001480g0040' => 'nta', 'Nitab4.5_0001827g0060' => 'nta', 'Nitab4.5_0002532g0040' => 'nta', 'Nitab4.5_0003783g0050' => 'nta', 'Nitab4.5_0004707g0030' => 'nta', 'Nitab4.5_0006222g0030' => 'nta', 'Nitab4.5_0006334g0020' => 'nta', 'Nitab4.5_0006950g0030' => 'nta', 'Nitab4.5_0006995g0010' => 'nta', 'Nitab4.5_0011489g0010' => 'nta', 'Nitab4.5_0014459g0010' => 'nta', 'Nn1g04645' => 'nnu', 'Nn2g11305' => 'nnu', 'Nn2g13552' => 'nnu', 'Nn2g15580' => 'nnu', 'Nn2g15805' => 'nnu', 'Nn5g30481' => 'nnu', 'Nn7g38378' => 'nnu', 'Oeu002841.1' => 'oeu', 'Oeu006887.1' => 'oeu', 'Oeu006888.1' => 'oeu', 'Oeu010104.1' => 'oeu', 'Oeu013833.1' => 'oeu', 'Oeu016812.1' => 'oeu', 'Oeu016813.1' => 'oeu', 'Oeu019737.1' => 'oeu', 'Oeu037261.1' => 'oeu', 'Oeu037889.1' => 'oeu', 'Oeu038986.1' => 'oeu', 'Oeu044268.1' => 'oeu', 'Oeu050859.1' => 'oeu', 'Oeu052752.1' => 'oeu', 'Oeu057595.1' => 'oeu', 'Os03g0167400' => 'osa', 'Os03g0267500' => 'osa', 'Os03g0606100' => 'osa', 'Os05g0252100' => 'osa', 'Os07g0591100' => 'osa', 'Os10g0411100' => 'osa', 'Os12g0581300' => 'osa', 'Peaxi162Scf00016g02620' => 'pax', 'Peaxi162Scf00039g01624' => 'pax', 'Peaxi162Scf00081g00917' => 'pax', 'Peaxi162Scf00152g00329' => 'pax', 'Peaxi162Scf00164g01522' => 'pax', 'Peaxi162Scf00463g00317' => 'pax', 'Peaxi162Scf00515g00316' => 'pax', 'Peaxi162Scf00611g00125' => 'pax', 'Peaxi162Scf00690g00214' => 'pax', 'Peaxi162Scf00925g00326' => 'pax', 'Peaxi162Scf01010g00125' => 'pax', 'PGR004G0536' => 'pgr', 'PGR031G0294' => 'pgr', 'PGR031G2950' => 'pgr', 'PGR031G3042' => 'pgr', 'PGR042G3939' => 'pgr', 'PGR044G0402' => 'pgr', 'PGR119G1552' => 'pgr', 'PGR142G3542' => 'pgr', 'PGSC0003DMG400005161' => 'stu', 'PGSC0003DMG400013939' => 'stu', 'PGSC0003DMG400014908' => 'stu', 'PGSC0003DMG400021537' => 'stu', 'PGSC0003DMG400023185' => 'stu', 'PGSC0003DMG400025725' => 'stu', 'PGSC0003DMG400025854' => 'stu', 'PGSC0003DMG401027132' => 'stu', 'PGSC0003DMG402027132' => 'stu', 'Phvul.001G015200' => 'pvu', 'Phvul.001G025900' => 'pvu', 'Phvul.001G200500' => 'pvu', 'Phvul.001G239000' => 'pvu', 'Phvul.002G028700' => 'pvu', 'Phvul.005G047500' => 'pvu', 'Phvul.007G042600' => 'pvu', 'Phvul.007G262500' => 'pvu', 'Phvul.008G227800' => 'pvu', 'Phvul.009G057200' => 'pvu', 'Potri.001G297500' => 'ptr', 'Potri.002G262400' => 'ptr', 'Potri.006G196800' => 'ptr', 'Potri.007G027800' => 'ptr', 'Potri.008G062500' => 'ptr', 'Potri.008G081700' => 'ptr', 'Potri.009G092400' => 'ptr', 'Potri.010G174200' => 'ptr', 'Potri.010G195200' => 'ptr', 'Potri.014G019900' => 'ptr', 'Potri.014G181500' => 'ptr', 'Potri.016G062400' => 'ptr', 'Prupe.1G381000' => 'ppe', 'Prupe.1G426600' => 'ppe', 'Prupe.2G243900' => 'ppe', 'Prupe.4G127900' => 'ppe', 'Prupe.7G085100' => 'ppe', 'Prupe.7G152200' => 'ppe', 'Prupe.8G138900' => 'ppe', 'Psat0s2786g0040' => 'psa', 'Psat0s3731g0040' => 'psa', 'Psat1g015600' => 'psa', 'Psat2g036240' => 'psa', 'Psat2g160880' => 'psa', 'Psat5g039440' => 'psa', 'Psat5g039560' => 'psa', 'Psat5g125800' => 'psa', 'Psat6g006440' => 'psa', 'Psat6g090680' => 'psa', 'Psat6g215880' => 'psa', 'PSO339G3169' => 'pso', 'PSO339G3942' => 'pso', 'PSO384G2974' => 'pso', 'PSO384G4627' => 'pso', 'PSO541G2009' => 'pso', 'PSO541G5305' => 'pso', 'PSO541G5328' => 'pso', 'PSO675G0761' => 'pso', 'PSO675G1383' => 'pso', 'PSO675G3697' => 'pso', 'PSO675G4037' => 'pso', 'PSO675G6751' => 'pso', 'QL02p002654' => 'qlo', 'QL02p008002' => 'qlo', 'QL02p028652' => 'qlo', 'QL04p094052' => 'qlo', 'QL06p045620' => 'qlo', 'QL07p025460' => 'qlo', 'QL08p062408' => 'qlo', 'QL11p032289' => 'qlo', 'RcHm_v2.0_Chr1g0369021' => 'rch', 'RcHm_v2.0_Chr1g0369031' => 'rch', 'RcHm_v2.0_Chr2g0101971' => 'rch', 'RcHm_v2.0_Chr3g0478731' => 'rch', 'RcHm_v2.0_Chr5g0023361' => 'rch', 'RcHm_v2.0_Chr6g0254271' => 'rch', 'RcHm_v2.0_Chr6g0300821' => 'rch', 'RcHm_v2.0_Chr6g0309141' => 'rch', 'Rhsim04G0090600' => 'rsi', 'Rhsim04G0095800' => 'rsi', 'Rhsim05G0089500' => 'rsi', 'Rhsim06G0034600' => 'rsi', 'Rhsim06G0244500' => 'rsi', 'Rhsim10G0122300' => 'rsi', 'Rhsim10G0161600' => 'rsi', 'Rhsim11G0155400' => 'rsi', 'RhsimUnG0126600' => 'rsi', 'Sabra02G0199200' => 'sbr', 'Sabra05G0102700' => 'sbr', 'Sabra06G0151300' => 'sbr', 'Sabra08G0046100' => 'sbr', 'Sabra08G0060900' => 'sbr', 'Sabra09G0071100' => 'sbr', 'Sabra10G0134100' => 'sbr', 'Sabra10G0150000' => 'sbr', 'Sabra14G0013000' => 'sbr', 'Sabra14G0141300' => 'sbr', 'Sabra16G0064200' => 'sbr', 'Sabra16G0186500' => 'sbr', 'SalBow3G4177' => 'sbo', 'SalBow5G2086' => 'sbo', 'SalBow6G2378' => 'sbo', 'SalBow6G2730' => 'sbo', 'SalBow6G3116' => 'sbo', 'SalBow6G4051' => 'sbo', 'SalBow6G6259' => 'sbo', 'SalBow7G0657' => 'sbo', 'SalBow7G1195' => 'sbo', 'SalBow8G2516' => 'sbo', 'SalBow8G3207' => 'sbo', 'SalBow8G4583' => 'sbo', 'Sc02g0007730' => 'sci', 'Sc07g0002450' => 'sci', 'Sc10g0002050' => 'sci', 'Sc14g0002630' => 'sci', 'Sc16g0000920' => 'sci', 'Sc16g0000970' => 'sci', 'Sed0006962' => 'sed', 'Sed0010228' => 'sed', 'Sed0011190' => 'sed', 'Sed0013680' => 'sed', 'Sed0015417' => 'sed', 'Sed0015433' => 'sed', 'Sed0015790' => 'sed', 'Sed0020867' => 'sed', 'Sed0024394' => 'sed', 'Sed0026011' => 'sed', 'SEGI_05270' => 'sgi', 'SEGI_07575' => 'sgi', 'SEGI_08027' => 'sgi', 'SEGI_08525' => 'sgi', 'SEGI_15317' => 'sgi', 'SEGI_22121' => 'sgi', 'SEGI_22272' => 'sgi', 'SEGI_22811' => 'sgi', 'SEGI_26078' => 'sgi', 'SEGI_30596' => 'sgi', 'SEGI_36331' => 'sgi', 'SEGI_39443' => 'sgi', 'SGA_v2.0_scaffold14G06946' => 'sas', 'SGA_v2.0_scaffold219G42515' => 'sas', 'SGA_v2.0_scaffold225G43003' => 'sas', 'SGA_v2.0_scaffold24G10236' => 'sas', 'SGA_v2.0_scaffold276G46646' => 'sas', 'SGA_v2.0_scaffold32G13021' => 'sas', 'SGA_v2.0_scaffold472G52099' => 'sas', 'SGA_v2.0_scaffold69G23034' => 'sas', 'SHI05224' => 'shi', 'SHI08165' => 'shi', 'SHI08374' => 'shi', 'SHI22912' => 'shi', 'SMO270G0028' => 'smo', 'SMO347G0532' => 'smo', 'Solyc01g107350.3' => 'sly', 'Solyc02g085490.2' => 'sly', 'Solyc03g051920.4' => 'sly', 'Solyc03g078650.4' => 'sly', 'Solyc04g078190.4' => 'sly', 'Solyc04g080220.3' => 'sly', 'Solyc05g052860.3' => 'sly', 'Solyc07g022840.1' => 'sly', 'Sopen01g049590' => 'spe', 'Sopen02g030170' => 'spe', 'Sopen03g011380' => 'spe', 'Sopen03g021560' => 'spe', 'Sopen04g031810' => 'spe', 'Sopen04g033800' => 'spe', 'Sopen05g031370' => 'spe', 'Sp1g23910' => 'spa', 'Sp1g36730' => 'spa', 'Sp2g29960' => 'spa', 'Sp3g17590' => 'spa', 'Sp5g06750' => 'spa', 'Sp5g30290' => 'spa', 'Sp5g34470' => 'spa', 'Sp6g36250' => 'spa', 'Sp6g37060' => 'spa', 'TAR369G0676' => 'tar', 'TAR376G0679' => 'tar', 'TAR376G1234' => 'tar', 'TAR381G0258' => 'tar', 'TAR381G0469' => 'tar', 'TAR381G1179' => 'tar', 'TAR623G0954' => 'tar', 'TAR625G0204' => 'tar', 'TAR627G0678' => 'tar', 'TAR628G1360' => 'tar', 'TAR633G2265' => 'tar', 'THA.LOC104798788' => 'tha', 'THA.LOC104799277' => 'tha', 'THA.LOC104806359' => 'tha', 'THA.LOC104808399' => 'tha', 'THA.LOC104810058' => 'tha', 'THA.LOC104813603' => 'tha', 'THA.LOC104814185' => 'tha', 'THA.LOC104816566' => 'tha', 'THA.LOC104825813' => 'tha', 'THA.LOC104826919' => 'tha', 'Thecc.01G038400' => 'tca', 'Thecc.02G112500' => 'tca', 'Thecc.05G179800' => 'tca', 'Thecc.07G191900' => 'tca', 'Thecc.08G024900' => 'tca', 'Thecc.08G093100' => 'tca', 'Thecc.10G029000' => 'tca', 'Thhalv10004430m.g' => 'esa', 'Thhalv10007666m.g' => 'esa', 'Thhalv10010310m.g' => 'esa', 'Thhalv10011429m.g' => 'esa', 'Thhalv10012901m.g' => 'esa', 'Thhalv10013560m.g' => 'esa', 'Thhalv10018620m.g' => 'esa', 'Thhalv10018668m.g' => 'esa', 'Thhalv10020616m.g' => 'esa', 'TPR.G12396' => 'tpr', 'TPR.G1428' => 'tpr', 'TPR.G1453' => 'tpr', 'TPR.G16279' => 'tpr', 'TPR.G19360' => 'tpr', 'TPR.G23530' => 'tpr', 'TPR.G27096' => 'tpr', 'TPR.G28680' => 'tpr', 'TPR.G29752' => 'tpr', 'TPR.G33699' => 'tpr', 'TPR.G33712' => 'tpr', 'TPR.G3628' => 'tpr', 'TPR.G3747' => 'tpr', 'TPR.G39956' => 'tpr', 'TPR.G40514' => 'tpr', 'TPR.G8045' => 'tpr', 'TWI09G0605' => 'twi', 'TWI09G0606' => 'twi', 'TWI09G1216' => 'twi', 'TWI12G1229' => 'twi', 'TWI12G1262' => 'twi', 'TWI31G0586' => 'twi', 'TWI53G0978' => 'twi', 'TWI53G1402' => 'twi', 'TWI56G0007' => 'twi', 'TWI56G0779' => 'twi', 'TWI59G1129' => 'twi', 'TWI74G0905' => 'twi', 'TWI79G0698' => 'twi', 'unitig_0.g882' => 'ugi', 'unitig_21.g20635' => 'ugi', 'unitig_21.g20725' => 'ugi', 'unitig_26.g10055' => 'ugi', 'unitig_27.g24811' => 'ugi', 'unitig_578.g16730' => 'ugi', 'unitig_61.g26032' => 'ugi', 'unitig_62.g23860' => 'ugi', 'unitig_64.g29776' => 'ugi', 'unitig_744.g24130' => 'ugi', 'unitig_749.g13690' => 'ugi', 'vmacro01984' => 'vma', 'vmacro07008' => 'vma', 'vmacro14259' => 'vma', 'vmacro19461' => 'vma', 'vmacro21460' => 'vma', 'vmacro21632' => 'vma', 'vmacro22123' => 'vma', 'vmacro22497' => 'vma', 'vmacro22498' => 'vma', 'VMungo0647G1897' => 'vmu', 'VMungo0647G2556' => 'vmu', 'VMungo0720G1718' => 'vmu', 'VMungo0720G2474' => 'vmu', 'VMungo0720G2945' => 'vmu', 'VMungo1080G1591' => 'vmu', 'VMungo1215G2565' => 'vmu', 'VMungo1309G2194' => 'vmu', 'VMungo1383G0004' => 'vmu', 'VMungo1383G1770' => 'vmu', 'Zm00001eb011950' => 'zma', 'Zm00001eb029990' => 'zma', 'Zm00001eb108290' => 'zma', 'Zm00001eb150080' => 'zma', 'Zm00001eb152310' => 'zma', 'Zm00001eb219240' => 'zma', 'Zm00001eb284460' => 'zma', 'Zm00001eb326340' => 'zma', 'Zm00001eb363790' => 'zma', 'Zm00001eb370340' => 'zma', 'Zm00001eb397930' => 'zma' ) $gf_id = 'HOM05D000525' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000525' ) $data_identifier = 'HOM05D000525' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 31, 'aar' => (int) 9, 'ach' => (int) 15, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 5, 'arhy' => (int) 31, 'ath' => (int) 9, 'atr' => (int) 7, 'acertr' => (int) 7, 'cqu' => (int) 8, 'bca' => (int) 35, 'bol' => (int) 17, 'bra' => (int) 15, 'can' => (int) 5, 'cansat' => (int) 8, 'chi' => (int) 9, 'cru' => (int) 9, 'car' => (int) 9, 'ccan' => (int) 8, 'cde' => (int) 11, 'cfa' => (int) 8, 'ccl' => (int) 7, 'cil' => (int) 10, 'cla' => (int) 8, 'col' => (int) 9, 'cpa' => (int) 9, 'csa' => (int) 10, 'camsi' => (int) 12, 'dca' => (int) 12, 'din' => (int) 16, 'dzi' => (int) 13, 'eca' => (int) 7, 'bvu' => (int) 4, 'egr' => (int) 9, 'fan' => (int) 37, 'fve' => (int) 8, 'gma' => (int) 20, 'ghi' => (int) 24, 'gra' => (int) 12, 'vvi' => (int) 7, 'han' => (int) 15, 'cav' => (int) 10, 'hma' => (int) 14, 'vpl' => (int) 13, 'sun' => (int) 5, 'lal' => (int) 15, 'lonja' => (int) 12, 'lja' => (int) 10, 'lsa' => (int) 7, 'mes' => (int) 13, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mdo' => (int) 15, 'mtr' => (int) 11, 'cme' => (int) 8, 'egut' => (int) 11, 'ama' => (int) 15, 'nta' => (int) 20, 'nnu' => (int) 7, 'oeu' => (int) 15, 'osa' => (int) 7, 'pax' => (int) 11, 'pgr' => (int) 8, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 12, 'ppe' => (int) 7, 'psa' => (int) 11, 'pso' => (int) 12, 'qlo' => (int) 8, 'rch' => (int) 8, 'rsi' => (int) 9, 'sbr' => (int) 12, 'sbo' => (int) 12, 'sci' => (int) 6, 'sed' => (int) 10, 'sgi' => (int) 12, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 2, 'sly' => (int) 8, 'spe' => (int) 7, 'spa' => (int) 9, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 9, 'tpr' => (int) 16, 'twi' => (int) 13, 'ugi' => (int) 11, 'vma' => (int) 9, 'vmu' => (int) 10, 'zma' => (int) 11 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb397930' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1